女高中生织部睦美等人在休学旅行中遭遇空难，漂到了一座孤岛上，而这座岛上，居然有着各种巨大的昆虫！还只是一群高中生的他们，能从这座地狱般的岛上逃出生天吗？

Compilation film of "Space Battleship Yamato 2199" TV series. The year is 2199. The human race has been crushed in their war with the Gamilos, driven into underground cities by the invader's assault. Scientists estimate they have only a year left. The young officers Susumu Kodai and Daisuke Shima receive a mysterious capsule from a ship that made an emergency landing on Mars and return with it to Earth. It contains humanity's last hope: the planet Iscandar on the other side of the Magellan Galaxy has the technology to defeat the Gamilos and restore the planet. The space battleship Yamato is entrusted with this task, but they have only one year before humanity ends.

After a chaotic heist, Lupin and Jigen find themselves becoming caretakers of a baby boy, while a young sky pirate called Yutika is after their loot. Yutika is an inhabitant of the city-state of Shahalta, which has recently fallen to a shady minister. Soon, Lupin's gang and Yutika join forces to uncover one of Shahalta's greatest treasures, facing off against both Shahaltan authorities and Zenigata.